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Saturday, December 31, 2011

Fwd: [Openeeg-list] MOD-EEG-SMT is finally in production

---------- Forwarded message ----------
From: "Joerg Hansmann" <info@jhansmann.de>
Date: Nov 10, 2011 10:13 AM
Subject: [Openeeg-list] MOD-EEG-SMT is finally in production
To: "Discussion of EEG hardware, software, training protocols, NFB theory - for developers and users." <openeeg-list@lists.sourceforge.net>

Hi,

a few days ago I got an email:

Tsvetan Usunov - OLIMEX LTD, 03.11.2011 08:19 :
> Hi Joerg,
...
> MOD-EEG-SMT is finally in production and next week we will have stock, it's
> complete 2 channel EEG device in plastic box, with USB connection and user
> should do nothing on the assembly all he need is to attach cables and work
>
> We also made Active electrodes for it, I attach both projects for your
> reference, feel free to post the schematic and board files on the OpenEEG site
> this is our contribution to the OpenEEG community.

EAGLE schematics and boards are attached as zip files.


Regards,

       Jörg

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Fwd: MEMS Express from MNX

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From: "MEMS News" <mems-news-owner@mems-exchange.org>
Date: Dec 30, 2011 3:36 PM
Subject: MEMS Express from MNX
To: <mems-news@mems-exchange.org>

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MEMS business

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Nanotechnology

thumbnailCotton computing goes live at Cornell textiles lab
Transistors made from cotton fibers are being explored at the Textiles Nanotechnology Laboratory at Cornell for use as clothing to collect, monitor and relay information. Envisioned end uses could take form as clothes measuring pollutants, ...
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Role of Nanotechnology in the Energy Industry | Market Research ...
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Fwd: PLoS ONE New Articles Published

---------- Forwarded message ----------
From: "PLoS ONE" <news@lists.plos.org>
Date: Dec 30, 2011 12:53 PM
Subject: PLoS ONE New Articles Published
To: <technologiclee@gmail.com>

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New Articles in PLoS ONE

Published December 22, 2011 to December 28, 2011

If articles are interdisciplinary then they may appear under more than one subject heading in the list below.

Subjects:

Anesthesiology and Pain Management

General Anesthetics Inhibit Erythropoietin Induction under Hypoxic Conditions in the Mouse Brain
Tomoharu Tanaka, Shinichi Kai, Tomohiro Koyama, Hiroki Daijo, Takehiko Adachi, Kazuhiko Fukuda, Kiichi Hirota

Acid Solution Is a Suitable Medium for Introducing QX-314 into Nociceptors through TRPV1 Channels to Produce Sensory-Specific Analgesic Effects
He Liu, Hong-Xing Zhang, Hui-Yan Hou, Xian-Fu Lu, Jing-Qiu Wei, Chun-Guang Wang, Li-Cai Zhang, Yin-Ming Zeng, Yong-Ping Wu, Jun-Li Cao

Back to top

Biochemistry

Alteration of Gene Expression Profile in Niemann-Pick Type C Mice Correlates with Tissue Damage and Oxidative Stress
Mary C. Vázquez, Talía del Pozo, Fermín A. Robledo, Gonzalo Carrasco, Leonardo Pavez, Felipe Olivares, Mauricio González, Silvana Zanlungo

Non-Negative Matrix Factorization for Learning Alignment-Specific Models of Protein Evolution
Ben Murrell, Thomas Weighill, Jan Buys, Robert Ketteringham, Sasha Moola, Gerdus Benade, Lise du Buisson, Daniel Kaliski, Tristan Hands, Konrad Scheffler

Who Needs Microtubules? Myogenic Reorganization of MTOC, Golgi Complex and ER Exit Sites Persists Despite Lack of Normal Microtubule Tracks
Kristien J. M. Zaal, Ericka Reid, Kambiz Mousavi, Tan Zhang, Amisha Mehta, Elisabeth Bugnard, Vittorio Sartorelli, Evelyn Ralston

The P-Loop Domain of Yeast Clp1 Mediates Interactions Between CF IA and CPF Factors in Pre-mRNA 3′ End Formation
Sandra Holbein, Simonetta Scola, Bernhard Loll, Beatriz Solange Dichtl, Wolfgang Hübner, Anton Meinhart, Bernhard Dichtl

Degradation of Pheromone and Plant Volatile Components by a Same Odorant-Degrading Enzyme in the Cotton Leafworm, Spodoptera littoralis
Nicolas Durand, Gerard Carot-Sans, Françoise Bozzolan, Gloria Rosell, David Siaussat, Stéphane Debernard, Thomas Chertemps, Martine Maïbèche-Coisne

Mechanisms Involved in Nicotinic Acetylcholine Receptor-Induced Neurotransmitter Release from Sympathetic Nerve Terminals in the Mouse Vas Deferens
Damian J. Williams, Peter Sidaway, Thomas C. Cunnane, Keith L. Brain

Long-Term Alterations of Cytokines and Growth Factors Expression in Irradiated Tissues and Relation with Histological Severity Scoring
Patrice Gallet, Bérengère Phulpin, Jean-Louis Merlin, Agnès Leroux, Pierre Bravetti, Hinda Mecellem, Nguyen Tran, Gilles Dolivet

Nanotube Action between Human Mesothelial Cells Reveals Novel Aspects of Inflammatory Responses
Julia Ranzinger, Amin Rustom, Marcus Abel, Julia Leyh, Lars Kihm, Margarete Witkowski, Peter Scheurich, Martin Zeier, Vedat Schwenger

The Mycobacterium Tuberculosis FAS-II Dehydratases and Methyltransferases Define the Specificity of the Mycolic Acid Elongation Complexes
Sylvain Cantaloube, Romain Veyron-Churlet, Nabila Haddache, Mamadou Daffé, Didier Zerbib

A Short Caspase-3 Isoform Inhibits Chemotherapy-Induced Apoptosis by Blocking Apoptosome Assembly
Frédérique Végran, Romain Boidot, Eric Solary, Sarab Lizard-Nacol

An Immunoassay for Dibutyl Phthalate Based on Direct Hapten Linkage to the Polystyrene Surface of Microtiter Plates
Chenxi Wei, Shumao Ding, Huihui You, Yaran Zhang, Yao Wang, Xu Yang, Junlin Yuan

The AAA-ATPase VPS4 Regulates Extracellular Secretion and Lysosomal Targeting of α-Synuclein
Takafumi Hasegawa, Masatoshi Konno, Toru Baba, Naoto Sugeno, Akio Kikuchi, Michiko Kobayashi, Emiko Miura, Nobuyuki Tanaka, Keiichi Tamai, Katsutoshi Furukawa, Hiroyuki Arai, Fumiaki Mori, Koichi Wakabayashi, Masashi Aoki, Yasuto Itoyama, Atsushi Takeda

Protein Kinase A Regulates Molecular Chaperone Transcription and Protein Aggregation
Yue Zhang, Ayesha Murshid, Thomas Prince, Stuart K. Calderwood

Estrogen-Mediated Upregulation of Noxa Is Associated with Cell Cycle Progression in Estrogen Receptor-Positive Breast Cancer Cells
Wensheng Liu, Wendy M. Swetzig, Rajesh Medisetty, Gokul M. Das

Increased Renal Methylglyoxal Formation with Down-Regulation of PGC-1α-FBPase Pathway in Cystathionine γ-Lyase Knockout Mice
Ashley A. Untereiner, Arti Dhar, Jianghai Liu, Lingyun Wu

Thymidine Kinase 2 Deficiency-Induced Mitochondrial DNA Depletion Causes Abnormal Development of Adipose Tissues and Adipokine Levels in Mice
Joan Villarroya, Beatriz Dorado, Maya R. Vilà, Elena Garcia-Arumí, Pere Domingo, Marta Giralt, Michio Hirano, Francesc Villarroya

Interactions among the A and T Units of an ECF-Type Biotin Transporter Analyzed by Site-Specific Crosslinking
Olivia Neubauer, Christin Reiffler, Laura Behrendt, Thomas Eitinger

Phosphorylation State-Dependent Interactions of Hepadnavirus Core Protein with Host Factors
Laurie Ludgate, Christina Adams, Jianming Hu

Phosphorylation of Vasodilator-Stimulated Phosphoprotein (VASP) Dampens Hepatic Ischemia-Reperfusion Injury
David Köhler, Philipp Birk, Klemens König, Andreas Straub, Therese Eldh, Julio C. Morote-Garcia, Peter Rosenberger

Functional Induction of the Cystine-Glutamate Exchanger System Xc- Activity in SH-SY5Y Cells by Unconjugated Bilirubin
Pablo J. Giraudi, Cristina Bellarosa, Carlos D. Coda-Zabetta, Paolo Peruzzo, Claudio Tiribelli

Lateral Gene Expression in Drosophila Early Embryos Is Supported by Grainyhead-Mediated Activation and Tiers of Dorsally-Localized Repression
Mayra Garcia, Angelike Stathopoulos

Duffy Antigen Receptor for Chemokines Mediates Chemokine Endocytosis through a Macropinocytosis-Like Process in Endothelial Cells
Yani Zhao, Nilam S. Mangalmurti, Zeyu Xiong, Bharat Prakash, Fengli Guo, Donna B. Stolz, Janet S. Lee

A Genomic Reappraisal of Symbiotic Function in the Aphid/Buchnera Symbiosis: Reduced Transporter Sets and Variable Membrane Organisations
Hubert Charles, Séverine Balmand, Araceli Lamelas, Ludovic Cottret, Vicente Pérez-Brocal, Béatrice Burdin, Amparo Latorre, Gérard Febvay, Stefano Colella, Federica Calevro, Yvan Rahbé

Heregulin β-1 Induces Loss of Cell-Cell Contact and Enhances Expression of MUC1 at the Cell Surface in HCC2998 and MKN45-1 Cells
Rintaro Okoshi, Chung-Li Shu, Sayoko Ihara, Yasuhisa Fukui

Morpholino Gene Knockdown in Adult Fundulus heteroclitus: Role of SGK1 in Seawater Acclimation
Emily G. Notch, Joseph R. Shaw, Bonita A. Coutermarsh, Marisa Dzioba, Bruce A. Stanton

The Cytokine Release Inhibitory Drug CRID3 Targets ASC Oligomerisation in the NLRP3 and AIM2 Inflammasomes
Rebecca C. Coll, Luke A. J. O'Neill

Double Mutation in Photosystem II Reaction Centers and Elevated CO2 Grant Thermotolerance to Mesophilic Cyanobacterium
Jorge Dinamarca, Oksana Shlyk-Kerner, David Kaftan, Eran Goldberg, Alexander Dulebo, Manuel Gidekel, Ana Gutierrez, Avigdor Scherz

Differential Effects of Pravastatin and Simvastatin on the Growth of Tumor Cells from Different Organ Sites
David G. Menter, Victoria P. Ramsauer, Sam Harirforoosh, Kanishka Chakraborty, Peiying Yang, Linda Hsi, Robert A. Newman, Koyamangalath Krishnan

Liver-Specific Commd1 Knockout Mice Are Susceptible to Hepatic Copper Accumulation
Willianne I. M. Vonk, Paulina Bartuzi, Prim de Bie, Niels Kloosterhuis, Catharina G. K. Wichers, Ruud Berger, Susan Haywood, Leo W. J. Klomp, Cisca Wijmenga, Bart van de Sluis

Carbohydrate Metabolism Is Essential for the Colonization of Streptococcus thermophilus in the Digestive Tract of Gnotobiotic Rats
Muriel Thomas, Laura Wrzosek, Leila Ben-Yahia, Marie-Louise Noordine, Christophe Gitton, Didier Chevret, Philippe Langella, Camille Mayeur, Claire Cherbuy, Françoise Rul

Identification and Functional Characterization of Novel Phosphorylation Sites in TAK1-Binding Protein (TAB) 1
Alexander Wolf, Knut Beuerlein, Christoph Eckart, Hendrik Weiser, Beate Dickkopf, Helmut Müller, Hiroaki Sakurai, Michael Kracht

Aminoacyl-tRNA-Charged Eukaryotic Elongation Factor 1A Is the Bona Fide Substrate for Legionella pneumophila Effector Glucosyltransferases
Tina Tzivelekidis, Thomas Jank, Corinna Pohl, Andreas Schlosser, Sabine Rospert, Charlotte R. Knudsen, Marina V. Rodnina, Yury Belyi, Klaus Aktories

Molecular Mechanisms of Bortezomib Resistant Adenocarcinoma Cells
Erika Suzuki, Susan Demo, Edgar Deu, Jonathan Keats, Shirin Arastu-Kapur, P. Leif Bergsagel, Mark K. Bennett, Christopher J. Kirk

Global Analysis of DNA Methylation by Methyl-Capture Sequencing Reveals Epigenetic Control of Cisplatin Resistance in Ovarian Cancer Cell
Wei Yu, Chengmeng Jin, Xiaoyan Lou, Xu Han, Lisha Li, Yinghua He, Hongyu Zhang, Kelong Ma, Jingde Zhu, Lihua Cheng, Biaoyang Lin

Elongase Reactions as Control Points in Long-Chain Polyunsaturated Fatty Acid Synthesis
Melissa K. Gregory, Robert A. Gibson, Rebecca J. Cook-Johnson, Leslie G. Cleland, Michael J. James

A Crucial Role of Activin A-Mediated Growth Hormone Suppression in Mouse and Human Heart Failure
Noritoshi Fukushima, Katsuhisa Matsuura, Hiroshi Akazawa, Atsushi Honda, Toshio Nagai, Toshinao Takahashi, Akiko Seki, Kagari M. Murasaki, Tatsuya Shimizu, Teruo Okano, Nobuhisa Hagiwara, Issei Komuro

Direct Observation of Defects and Increased Ion Permeability of a Membrane Induced by Structurally Disordered Cu/Zn-Superoxide Dismutase Aggregates
Inhee Choi, Hyeon Don Song, Suseung Lee, Young In Yang, Joo Hyun Nam, Sung Joon Kim, Jung-Joon Sung, Taewook Kang, Jongheop Yi

Phosphorylation and Activation of the Plasma Membrane Na+/H+ Exchanger (NHE1) during Osmotic Cell Shrinkage
Robert R. Rigor, Catalina Damoc, Brett S. Phinney, Peter M. Cala

Divergence in Sex Steroid Hormone Signaling between Sympatric Species of Japanese Threespine Stickleback
Jun Kitano, Yui Kawagishi, Seiichi Mori, Catherine L. Peichel, Takashi Makino, Masakado Kawata, Makoto Kusakabe

Sucrose Monoester Micelles Size Determined by Fluorescence Correlation Spectroscopy (FCS)
Susana A. Sanchez, Enrico Gratton, Antonio L. Zanocco, Else Lemp, German Gunther

Expression of Trichoderma reesei β-Mannanase in Tobacco Chloroplasts and Its Utilization in Lignocellulosic Woody Biomass Hydrolysis
Pankaj Agrawal, Dheeraj Verma, Henry Daniell

The Promigratory Activity of the Matricellular Protein Galectin-3 Depends on the Activation of PI-3 Kinase
Fabiana H. M. Melo, Diego Butera, Mara de Souza Junqueira, Daniel K. Hsu, Ana Maria Moura da Silva, Fu-Tong Liu, Marinilice F. Santos, Roger Chammas

Role of Palladin Phosphorylation by Extracellular Signal-Regulated Kinase in Cell Migration
Eri Asano, Masao Maeda, Hitoki Hasegawa, Satoko Ito, Toshinori Hyodo, Hong Yuan, Masahide Takahashi, Michinari Hamaguchi, Takeshi Senga

Domain Analysis Reveals That a Deubiquitinating Enzyme USP13 Performs Non-Activating Catalysis for Lys63-Linked Polyubiquitin
Yu-Hang Zhang, Chen-Jie Zhou, Zi-Ren Zhou, Ai-Xin Song, Hong-Yu Hu

Pax3 Stimulates p53 Ubiquitination and Degradation Independent of Transcription
Xiao Dan Wang, Sarah C. Morgan, Mary R. Loeken

Nitric Oxide-Sensitive Guanylyl Cyclase Is Differentially Regulated by Nuclear and Non-Nuclear Estrogen Pathways in Anterior Pituitary Gland
Jimena P. Cabilla, Silvana I. Nudler, Sonia A. Ronchetti, Fernanda A. Quinteros, Mercedes Lasaga, Beatriz H. Duvilanski

Characterization of Fluorescent Eye Markers for Mammalian Transgenic Studies
Jonathan C. Cornett, Sean F. Landrette, Tian Xu

Oligomerization of ZFYVE27 (Protrudin) Is Necessary to Promote Neurite Extension
D. V. Krishna Pantakani, Marta M. Czyzewska, Anna Sikorska, Chiranjeevi Bodda, Ashraf U. Mannan

Trans Fatty Acids Induce Vascular Inflammation and Reduce Vascular Nitric Oxide Production in Endothelial Cells
Naomi G. Iwata, Matilda Pham, Norma O. Rizzo, Andrew M. Cheng, Ezekiel Maloney, Francis Kim

Molecular Insights into the Pathogenesis of Alzheimer's Disease and Its Relationship to Normal Aging
Alexei A. Podtelezhnikov, Keith Q. Tanis, Michael Nebozhyn, William J. Ray, David J. Stone, Andrey P. Loboda

Back to top

Biophysics

Programmed Bending Reveals Dynamic Mechanochemical Coupling in Supported Lipid Bilayers
Sean F. Gilmore, Harika Nanduri, Atul N. Parikh

Who Needs Microtubules? Myogenic Reorganization of MTOC, Golgi Complex and ER Exit Sites Persists Despite Lack of Normal Microtubule Tracks
Kristien J. M. Zaal, Ericka Reid, Kambiz Mousavi, Tan Zhang, Amisha Mehta, Elisabeth Bugnard, Vittorio Sartorelli, Evelyn Ralston

Loops Determine the Mechanical Properties of Mitotic Chromosomes
Yang Zhang, Dieter W. Heermann

Long-Term Alterations of Cytokines and Growth Factors Expression in Irradiated Tissues and Relation with Histological Severity Scoring
Patrice Gallet, Bérengère Phulpin, Jean-Louis Merlin, Agnès Leroux, Pierre Bravetti, Hinda Mecellem, Nguyen Tran, Gilles Dolivet

The AAA-ATPase VPS4 Regulates Extracellular Secretion and Lysosomal Targeting of α-Synuclein
Takafumi Hasegawa, Masatoshi Konno, Toru Baba, Naoto Sugeno, Akio Kikuchi, Michiko Kobayashi, Emiko Miura, Nobuyuki Tanaka, Keiichi Tamai, Katsutoshi Furukawa, Hiroyuki Arai, Fumiaki Mori, Koichi Wakabayashi, Masashi Aoki, Yasuto Itoyama, Atsushi Takeda

Protein Kinase A Regulates Molecular Chaperone Transcription and Protein Aggregation
Yue Zhang, Ayesha Murshid, Thomas Prince, Stuart K. Calderwood

Physical Properties of Biological Entities: An Introduction to the Ontology of Physics for Biology
Daniel L. Cook, Fred L. Bookstein, John H. Gennari

Direct Observation of Defects and Increased Ion Permeability of a Membrane Induced by Structurally Disordered Cu/Zn-Superoxide Dismutase Aggregates
Inhee Choi, Hyeon Don Song, Suseung Lee, Young In Yang, Joo Hyun Nam, Sung Joon Kim, Jung-Joon Sung, Taewook Kang, Jongheop Yi

Phosphorylation and Activation of the Plasma Membrane Na+/H+ Exchanger (NHE1) during Osmotic Cell Shrinkage
Robert R. Rigor, Catalina Damoc, Brett S. Phinney, Peter M. Cala

Characterization of Fluorescent Eye Markers for Mammalian Transgenic Studies
Jonathan C. Cornett, Sean F. Landrette, Tian Xu

Back to top

Biotechnology

Programmed Bending Reveals Dynamic Mechanochemical Coupling in Supported Lipid Bilayers
Sean F. Gilmore, Harika Nanduri, Atul N. Parikh

Critical Role of VCP/p97 in the Pathogenesis and Progression of Non-Small Cell Lung Carcinoma
Christopher W. Valle, Taehong Min, Manish Bodas, Steven Mazur, Shahnaz Begum, Danni Tang, Neeraj Vij

Bifunctional Anti-Huntingtin Proteasome-Directed Intrabodies Mediate Efficient Degradation of Mutant Huntingtin Exon 1 Protein Fragments
David C. Butler, Anne Messer

The Mycobacterium Tuberculosis FAS-II Dehydratases and Methyltransferases Define the Specificity of the Mycolic Acid Elongation Complexes
Sylvain Cantaloube, Romain Veyron-Churlet, Nabila Haddache, Mamadou Daffé, Didier Zerbib

Identification of New Alleles and the Determination of Alleles and Genotypes Frequencies at the CYP2D6 Gene in Emiratis
Rula Y. Qumsieh, Bassam R. Ali, Yousef M. Abdulrazzaq, Ossama Osman, Nadia A. Akawi, Salim M. A. Bastaki

A Novel 'Gene Insertion/Marker Out' (GIMO) Method for Transgene Expression and Gene Complementation in Rodent Malaria Parasites
Jing-wen Lin, Takeshi Annoura, Mohammed Sajid, Séverine Chevalley-Maurel, Jai Ramesar, Onny Klop, Blandine M. D. Franke-Fayard, Chris J. Janse, Shahid M. Khan

Gene Flow in Genetically Modified Wheat
Silvan Rieben, Olena Kalinina, Bernhard Schmid, Simon L. Zeller

Double Mutation in Photosystem II Reaction Centers and Elevated CO2 Grant Thermotolerance to Mesophilic Cyanobacterium
Jorge Dinamarca, Oksana Shlyk-Kerner, David Kaftan, Eran Goldberg, Alexander Dulebo, Manuel Gidekel, Ana Gutierrez, Avigdor Scherz

Differential Gene Expression from Microarray Analysis Distinguishes Woven and Lamellar Bone Formation in the Rat Ulna following Mechanical Loading
Jennifer A. McKenzie, Elise C. Bixby, Matthew J. Silva

Molecular Mechanisms of Bortezomib Resistant Adenocarcinoma Cells
Erika Suzuki, Susan Demo, Edgar Deu, Jonathan Keats, Shirin Arastu-Kapur, P. Leif Bergsagel, Mark K. Bennett, Christopher J. Kirk

Physical Properties of Biological Entities: An Introduction to the Ontology of Physics for Biology
Daniel L. Cook, Fred L. Bookstein, John H. Gennari

Combinatorial Polymer Electrospun Matrices Promote Physiologically-Relevant Cardiomyogenic Stem Cell Differentiation
Mukesh K. Gupta, Joel M. Walthall, Raghav Venkataraman, Spencer W. Crowder, Dae Kwang Jung, Shann S. Yu, Tromondae K. Feaster, Xintong Wang, Todd D. Giorgio, Charles C. Hong, Franz J. Baudenbacher, Antonis K. Hatzopoulos, Hak-Joon Sung

Latitudinal Gradients in Degradation of Marine Dissolved Organic Carbon
Carol Arnosti, Andrew D. Steen, Kai Ziervogel, Sherif Ghobrial, Wade H. Jeffrey

Direct Observation of Defects and Increased Ion Permeability of a Membrane Induced by Structurally Disordered Cu/Zn-Superoxide Dismutase Aggregates
Inhee Choi, Hyeon Don Song, Suseung Lee, Young In Yang, Joo Hyun Nam, Sung Joon Kim, Jung-Joon Sung, Taewook Kang, Jongheop Yi

Expression of Trichoderma reesei β-Mannanase in Tobacco Chloroplasts and Its Utilization in Lignocellulosic Woody Biomass Hydrolysis
Pankaj Agrawal, Dheeraj Verma, Henry Daniell

Activity-Induced Remodeling of Olfactory Bulb Microcircuits Revealed by Monosynaptic Tracing
Benjamin R. Arenkiel, Hiroshi Hasegawa, Jason J. Yi, Rylan S. Larsen, Michael L. Wallace, Benjamin D. Philpot, Fan Wang, Michael D. Ehlers

Characterization of Fluorescent Eye Markers for Mammalian Transgenic Studies
Jonathan C. Cornett, Sean F. Landrette, Tian Xu

Haplotype Analysis Improved Evidence for Candidate Genes for Intramuscular Fat Percentage from a Genome Wide Association Study of Cattle
William Barendse

Back to top

Cell Biology

Alteration of Gene Expression Profile in Niemann-Pick Type C Mice Correlates with Tissue Damage and Oxidative Stress
Mary C. Vázquez, Talía del Pozo, Fermín A. Robledo, Gonzalo Carrasco, Leonardo Pavez, Felipe Olivares, Mauricio González, Silvana Zanlungo

Who Needs Microtubules? Myogenic Reorganization of MTOC, Golgi Complex and ER Exit Sites Persists Despite Lack of Normal Microtubule Tracks
Kristien J. M. Zaal, Ericka Reid, Kambiz Mousavi, Tan Zhang, Amisha Mehta, Elisabeth Bugnard, Vittorio Sartorelli, Evelyn Ralston

Critical Role of VCP/p97 in the Pathogenesis and Progression of Non-Small Cell Lung Carcinoma
Christopher W. Valle, Taehong Min, Manish Bodas, Steven Mazur, Shahnaz Begum, Danni Tang, Neeraj Vij

Loops Determine the Mechanical Properties of Mitotic Chromosomes
Yang Zhang, Dieter W. Heermann

Apc Mutation Enhances PyMT-Induced Mammary Tumorigenesis
Jenifer R. Prosperi, Andrey I. Khramtsov, Galina F. Khramtsova, Kathleen H. Goss

The HIV-1 Transactivator Factor (Tat) Induces Enterocyte Apoptosis through a Redox-Mediated Mechanism
Vittoria Buccigrossi, Gabriella Laudiero, Emanuele Nicastro, Erasmo Miele, Franca Esposito, Alfredo Guarino

Induction of Bcl-2 Expression by Hepatitis B Virus Pre-S2 Mutant Large Surface Protein Resistance to 5-Fluorouracil Treatment in Huh-7 Cells
Jui-Hsiang Hung, Yen-Ni Teng, Lily Hui-Ching Wang, Ih-Jen Su, Clay C. C. Wang, Wenya Huang, Kuan-Han Lee, Kuan-Ying Lu, Lyu-Han Wang

A Short Caspase-3 Isoform Inhibits Chemotherapy-Induced Apoptosis by Blocking Apoptosome Assembly
Frédérique Végran, Romain Boidot, Eric Solary, Sarab Lizard-Nacol

Zinc Deficiency Leads to Lipofuscin Accumulation in the Retinal Pigment Epithelium of Pigmented Rats
Sylvie Julien, Antje Biesemeier, Despina Kokkinou, Oliver Eibl, Ulrich Schraermeyer

Y-Chromosome Variation in Hominids: Intraspecific Variation Is Limited to the Polygamous Chimpanzee
Gabriele Greve, Evguenia Alechine, Juan J. Pasantes, Christine Hodler, Wolfram Rietschel, Terence J. Robinson, Werner Schempp

The AAA-ATPase VPS4 Regulates Extracellular Secretion and Lysosomal Targeting of α-Synuclein
Takafumi Hasegawa, Masatoshi Konno, Toru Baba, Naoto Sugeno, Akio Kikuchi, Michiko Kobayashi, Emiko Miura, Nobuyuki Tanaka, Keiichi Tamai, Katsutoshi Furukawa, Hiroyuki Arai, Fumiaki Mori, Koichi Wakabayashi, Masashi Aoki, Yasuto Itoyama, Atsushi Takeda

FHA-Mediated Cell-Substrate and Cell-Cell Adhesions Are Critical for Bordetella pertussis Biofilm Formation on Abiotic Surfaces and in the Mouse Nose and the Trachea
Diego O. Serra, Matt S. Conover, Laura Arnal, Gina Parise Sloan, María E. Rodriguez, Osvaldo M. Yantorno, Rajendar Deora

Hypoxia-Induced Invadopodia Formation Involves Activation of NHE-1 by the p90 Ribosomal S6 Kinase (p90RSK)
Fabrice Lucien, Karine Brochu-Gaudreau, Dominique Arsenault, Kelly Harper, Claire M. Dubois

Protein Kinase A Regulates Molecular Chaperone Transcription and Protein Aggregation
Yue Zhang, Ayesha Murshid, Thomas Prince, Stuart K. Calderwood

Estrogen-Mediated Upregulation of Noxa Is Associated with Cell Cycle Progression in Estrogen Receptor-Positive Breast Cancer Cells
Wensheng Liu, Wendy M. Swetzig, Rajesh Medisetty, Gokul M. Das

Epithelial Cells Derived from Swine Bone Marrow Express Stem Cell Markers and Support Influenza Virus Replication In Vitro
Mahesh Khatri, Yehia M. Saif

Functional Induction of the Cystine-Glutamate Exchanger System Xc- Activity in SH-SY5Y Cells by Unconjugated Bilirubin
Pablo J. Giraudi, Cristina Bellarosa, Carlos D. Coda-Zabetta, Paolo Peruzzo, Claudio Tiribelli

Duffy Antigen Receptor for Chemokines Mediates Chemokine Endocytosis through a Macropinocytosis-Like Process in Endothelial Cells
Yani Zhao, Nilam S. Mangalmurti, Zeyu Xiong, Bharat Prakash, Fengli Guo, Donna B. Stolz, Janet S. Lee

General Anesthetics Inhibit Erythropoietin Induction under Hypoxic Conditions in the Mouse Brain
Tomoharu Tanaka, Shinichi Kai, Tomohiro Koyama, Hiroki Daijo, Takehiko Adachi, Kazuhiko Fukuda, Kiichi Hirota

Heregulin β-1 Induces Loss of Cell-Cell Contact and Enhances Expression of MUC1 at the Cell Surface in HCC2998 and MKN45-1 Cells
Rintaro Okoshi, Chung-Li Shu, Sayoko Ihara, Yasuhisa Fukui

Morpholino Gene Knockdown in Adult Fundulus heteroclitus: Role of SGK1 in Seawater Acclimation
Emily G. Notch, Joseph R. Shaw, Bonita A. Coutermarsh, Marisa Dzioba, Bruce A. Stanton

A Higher-Order Generalized Singular Value Decomposition for Comparison of Global mRNA Expression from Multiple Organisms
Sri Priya Ponnapalli, Michael A. Saunders, Charles F. Van Loan, Orly Alter

Chronic Deficiency of Nitric Oxide Affects Hypoxia Inducible Factor-1α (HIF-1α) Stability and Migration in Human Endothelial Cells
Maria Grazia Cattaneo, Elisa Cappellini, Roberta Benfante, Maurizio Ragni, Fausta Omodeo-Salè, Enzo Nisoli, Nica Borgese, Lucia M. Vicentini

M-CSF Induces Monocyte Survival by Activating NF-κB p65 Phosphorylation at Ser276 via Protein Kinase C
Yijie Wang, Xiaokui Mo, Melissa G. Piper, Hongmei Wang, Narasimham L. Parinandi, Denis Guttridge, Clay B. Marsh

Combinatorial Polymer Electrospun Matrices Promote Physiologically-Relevant Cardiomyogenic Stem Cell Differentiation
Mukesh K. Gupta, Joel M. Walthall, Raghav Venkataraman, Spencer W. Crowder, Dae Kwang Jung, Shann S. Yu, Tromondae K. Feaster, Xintong Wang, Todd D. Giorgio, Charles C. Hong, Franz J. Baudenbacher, Antonis K. Hatzopoulos, Hak-Joon Sung

Translational Regulation of Utrophin by miRNAs
Utpal Basu, Olga Lozynska, Catherine Moorwood, Gopal Patel, Steve D. Wilton, Tejvir S. Khurana

Improved Culture-Based Isolation of Differentiating Endothelial Progenitor Cells from Mouse Bone Marrow Mononuclear Cells
Haruki Sekiguchi, Masaaki Ii, Kentaro Jujo, Ayumi Yokoyama, Nobuhisa Hagiwara, Takayuki Asahara

The Absence of MIST1 Leads to Increased Ethanol Sensitivity and Decreased Activity of the Unfolded Protein Response in Mouse Pancreatic Acinar Cells
Sruthi Alahari, Rashid Mehmood, Charis L. Johnson, Christopher L. Pin

The Effects of Mechanical Stress on the Growth, Differentiation, and Paracrine Factor Production of Cardiac Stem Cells
Hiroshi Kurazumi, Masayuki Kubo, Mako Ohshima, Yumi Yamamoto, Yoshihiro Takemoto, Ryo Suzuki, Shigeru Ikenaga, Akihito Mikamo, Koichi Udo, Kimikazu Hamano, Tao-Sheng Li

Zebrafish prox1b Mutants Develop a Lymphatic Vasculature, and prox1b Does Not Specifically Mark Lymphatic Endothelial Cells
Shijie Tao, Merlijn Witte, Robert J. Bryson-Richardson, Peter D. Currie, Benjamin M. Hogan, Stefan Schulte-Merker

Direct Observation of Defects and Increased Ion Permeability of a Membrane Induced by Structurally Disordered Cu/Zn-Superoxide Dismutase Aggregates
Inhee Choi, Hyeon Don Song, Suseung Lee, Young In Yang, Joo Hyun Nam, Sung Joon Kim, Jung-Joon Sung, Taewook Kang, Jongheop Yi

Helicobacter pylori Infection of Gastrointestinal Epithelial Cells in vitro Induces Mesenchymal Stem Cell Migration through an NF-κB-Dependent Pathway
Jonathan Ferrand, Philippe Lehours, Annie Schmid-Alliana, Francis Mégraud, Christine Varon

In Vivo Tracking of Human Neural Stem Cells with 19F Magnetic Resonance Imaging
Philipp Boehm-Sturm, Luam Mengler, Stefan Wecker, Mathias Hoehn, Therése Kallur

Common Promoter Elements in Odorant and Vomeronasal Receptor Genes
Jussara S. Michaloski, Pedro A. F. Galante, Maíra H. Nagai, Lucia Armelin-Correa, Ming-Shan Chien, Hiroaki Matsunami, Bettina Malnic

Prostate Cancer Cell Lines under Hypoxia Exhibit Greater Stem-Like Properties
Yuanyuan Ma, Dongming Liang, Jian Liu, Karol Axcrona, Gunnar Kvalheim, Trond Stokke, Jahn M. Nesland, Zhenhe Suo

Role of Palladin Phosphorylation by Extracellular Signal-Regulated Kinase in Cell Migration
Eri Asano, Masao Maeda, Hitoki Hasegawa, Satoko Ito, Toshinori Hyodo, Hong Yuan, Masahide Takahashi, Michinari Hamaguchi, Takeshi Senga

Adult Body Weight Is Programmed by a Redox-Regulated and Energy-Dependent Process during the Pronuclear Stage in Mouse
Bernadette Banrezes, Thierry Sainte-Beuve, Eugénie Canon, Richard M. Schultz, José Cancela, Jean-Pierre Ozil

Polysialic Acid Is Required for Dopamine D2 Receptor-Mediated Plasticity Involving Inhibitory Circuits of the Rat Medial Prefrontal Cortex
Esther Castillo-Gómez, Emilio Varea, José Miguel Blasco-Ibáñez, Carlos Crespo, Juan Nacher

Oligomerization of ZFYVE27 (Protrudin) Is Necessary to Promote Neurite Extension
D. V. Krishna Pantakani, Marta M. Czyzewska, Anna Sikorska, Chiranjeevi Bodda, Ashraf U. Mannan

Trans Fatty Acids Induce Vascular Inflammation and Reduce Vascular Nitric Oxide Production in Endothelial Cells
Naomi G. Iwata, Matilda Pham, Norma O. Rizzo, Andrew M. Cheng, Ezekiel Maloney, Francis Kim

Molecular Insights into the Pathogenesis of Alzheimer's Disease and Its Relationship to Normal Aging
Alexei A. Podtelezhnikov, Keith Q. Tanis, Michael Nebozhyn, William J. Ray, David J. Stone, Andrey P. Loboda

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Chemistry

Programmed Bending Reveals Dynamic Mechanochemical Coupling in Supported Lipid Bilayers
Sean F. Gilmore, Harika Nanduri, Atul N. Parikh

Combinatorial Polymer Electrospun Matrices Promote Physiologically-Relevant Cardiomyogenic Stem Cell Differentiation
Mukesh K. Gupta, Joel M. Walthall, Raghav Venkataraman, Spencer W. Crowder, Dae Kwang Jung, Shann S. Yu, Tromondae K. Feaster, Xintong Wang, Todd D. Giorgio, Charles C. Hong, Franz J. Baudenbacher, Antonis K. Hatzopoulos, Hak-Joon Sung

Latitudinal Gradients in Degradation of Marine Dissolved Organic Carbon
Carol Arnosti, Andrew D. Steen, Kai Ziervogel, Sherif Ghobrial, Wade H. Jeffrey

Direct Observation of Defects and Increased Ion Permeability of a Membrane Induced by Structurally Disordered Cu/Zn-Superoxide Dismutase Aggregates
Inhee Choi, Hyeon Don Song, Suseung Lee, Young In Yang, Joo Hyun Nam, Sung Joon Kim, Jung-Joon Sung, Taewook Kang, Jongheop Yi

Sucrose Monoester Micelles Size Determined by Fluorescence Correlation Spectroscopy (FCS)
Susana A. Sanchez, Enrico Gratton, Antonio L. Zanocco, Else Lemp, German Gunther

Domain Analysis Reveals That a Deubiquitinating Enzyme USP13 Performs Non-Activating Catalysis for Lys63-Linked Polyubiquitin
Yu-Hang Zhang, Chen-Jie Zhou, Zi-Ren Zhou, Ai-Xin Song, Hong-Yu Hu

Increase in Diarrheal Disease Associated with Arsenic Mitigation in Bangladesh
Jianyong Wu, Alexander van Geen, Kazi Matin Ahmed, Yasuyuki Akita Jahangir Alam, Patricia J. Culligan, Veronica Escamilla, John Feighery, Andrew S. Ferguson, Peter Knappett, Brian J. Mailloux, Larry D. McKay, Marc L. Serre, P. Kim Streatfield, Mohammad Yunus, Michael Emch

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Computational Biology

Alteration of Gene Expression Profile in Niemann-Pick Type C Mice Correlates with Tissue Damage and Oxidative Stress
Mary C. Vázquez, Talía del Pozo, Fermín A. Robledo, Gonzalo Carrasco, Leonardo Pavez, Felipe Olivares, Mauricio González, Silvana Zanlungo

Non-Negative Matrix Factorization for Learning Alignment-Specific Models of Protein Evolution
Ben Murrell, Thomas Weighill, Jan Buys, Robert Ketteringham, Sasha Moola, Gerdus Benade, Lise du Buisson, Daniel Kaliski, Tristan Hands, Konrad Scheffler

Critical Role of VCP/p97 in the Pathogenesis and Progression of Non-Small Cell Lung Carcinoma
Christopher W. Valle, Taehong Min, Manish Bodas, Steven Mazur, Shahnaz Begum, Danni Tang, Neeraj Vij

Gene Regulatory Network Reconstruction Using Bayesian Networks, the Dantzig Selector, the Lasso and Their Meta-Analysis
Matthieu Vignes, Jimmy Vandel, David Allouche, Nidal Ramadan-Alban, Christine Cierco-Ayrolles, Thomas Schiex, Brigitte Mangin, Simon de Givry

Partitioning the Aggregation of Parasites on Hosts into Intrinsic and Extrinsic Components via an Extended Poisson-Gamma Mixture Model
Justin M. Calabrese, Jesse L. Brunner, Richard S. Ostfeld

Loops Determine the Mechanical Properties of Mitotic Chromosomes
Yang Zhang, Dieter W. Heermann

Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
Koji Fujimura, Matthew A. Conte, Thomas D. Kocher

Design and Implementation of Degenerate Microsatellite Primers for the Mammalian Clade
Emmanuel Buschiazzo, Josephine S. Beck, Neil J. Gemmell

Reassessment of Blood Gene Expression Markers for the Prognosis of Relapsing-Remitting Multiple Sclerosis
Michael Hecker, Brigitte Katrin Paap, Robert Hermann Goertsches, Ole Kandulski, Christian Fatum, Dirk Koczan, Hans-Peter Hartung, Hans-Juergen Thiesen, Uwe Klaus Zettl

Differential Trends in the Codon Usage Patterns in HIV-1 Genes
Aridaman Pandit, Somdatta Sinha

Further Support to the Uncoupling-to-Survive Theory: The Genetic Variation of Human UCP Genes Is Associated with Longevity
Giuseppina Rose, Paolina Crocco, Francesco De Rango, Alberto Montesanto, Giuseppe Passarino

Dental Occlusion in a Split Amazon Indigenous Population: Genetics Prevails over Environment
David Normando, Jorge Faber, João Farias Guerreiro, Cátia Cardoso Abdo Quintão

Lateral Gene Expression in Drosophila Early Embryos Is Supported by Grainyhead-Mediated Activation and Tiers of Dorsally-Localized Repression
Mayra Garcia, Angelike Stathopoulos

Preservation of Ranking Order in the Expression of Human Housekeeping Genes
Grace T. W. Shaw, Edward S. C. Shih, Chun-Houh Chen, Ming-Jing Hwang

Selection against Accumulating Mutations in Niche-Preference Genes Can Drive Speciation
Niclas Norrström, Wayne M. Getz, Noél M. A. Holmgren

A Genomic Reappraisal of Symbiotic Function in the Aphid/Buchnera Symbiosis: Reduced Transporter Sets and Variable Membrane Organisations
Hubert Charles, Séverine Balmand, Araceli Lamelas, Ludovic Cottret, Vicente Pérez-Brocal, Béatrice Burdin, Amparo Latorre, Gérard Febvay, Stefano Colella, Federica Calevro, Yvan Rahbé

Pathway-Based Analysis of a Melanoma Genome-Wide Association Study: Analysis of Genes Related to Tumour-Immunosuppression
Nils Schoof, Mark M. Iles, D. Timothy Bishop, Julia A. Newton-Bishop, Jennifer H. Barrett, GenoMEL consortium

Identification of New Alleles and the Determination of Alleles and Genotypes Frequencies at the CYP2D6 Gene in Emiratis
Rula Y. Qumsieh, Bassam R. Ali, Yousef M. Abdulrazzaq, Ossama Osman, Nadia A. Akawi, Salim M. A. Bastaki

Polymorphisms in the RNASE3 Gene Are Associated with Susceptibility to Cerebral Malaria in Ghanaian Children
Bright Adu, Daniel Dodoo, Selorme Adukpo, Ben A. Gyan, Paula L. Hedley, Bamenla Goka, George O. Adjei, Severin O. Larsen, Michael Christiansen, Michael Theisen

High Connectivity in the Deepwater Snapper Pristipomoides filamentosus (Lutjanidae) across the Indo-Pacific with Isolation of the Hawaiian Archipelago
Michelle R. Gaither, Shelley A. Jones, Christopher Kelley, Stephen J. Newman, Laurie Sorenson, Brian W. Bowen

Gene Flow in Genetically Modified Wheat
Silvan Rieben, Olena Kalinina, Bernhard Schmid, Simon L. Zeller

Differential Gene Expression from Microarray Analysis Distinguishes Woven and Lamellar Bone Formation in the Rat Ulna following Mechanical Loading
Jennifer A. McKenzie, Elise C. Bixby, Matthew J. Silva

Periodic Active Case Finding for TB: When to Look?
Peter J. Dodd, Richard G. White, Elizabeth L. Corbett

Identification and Functional Characterization of Novel Phosphorylation Sites in TAK1-Binding Protein (TAB) 1
Alexander Wolf, Knut Beuerlein, Christoph Eckart, Hendrik Weiser, Beate Dickkopf, Helmut Müller, Hiroaki Sakurai, Michael Kracht

A Higher-Order Generalized Singular Value Decomposition for Comparison of Global mRNA Expression from Multiple Organisms
Sri Priya Ponnapalli, Michael A. Saunders, Charles F. Van Loan, Orly Alter

Physical Properties of Biological Entities: An Introduction to the Ontology of Physics for Biology
Daniel L. Cook, Fred L. Bookstein, John H. Gennari

Tramtrack Is Genetically Upstream of Genes Controlling Tracheal Tube Size in Drosophila
Barbara Rotstein, David Molnar, Boris Adryan, Marta Llimargas

Temporal Recalibration in Vocalization Induced by Adaptation of Delayed Auditory Feedback
Kosuke Yamamoto, Hideaki Kawabata

Global Analysis of DNA Methylation by Methyl-Capture Sequencing Reveals Epigenetic Control of Cisplatin Resistance in Ovarian Cancer Cell
Wei Yu, Chengmeng Jin, Xiaoyan Lou, Xu Han, Lisha Li, Yinghua He, Hongyu Zhang, Kelong Ma, Jingde Zhu, Lihua Cheng, Biaoyang Lin

Extent of Height Variability Explained by Known Height-Associated Genetic Variants in an Isolated Population of the Adriatic Coast of Croatia
Ge Zhang, Rebekah Karns, Guangyun Sun, Subba Rao Indugula, Hong Cheng, Dubravka Havas-Augustin, Natalija Novokmet, Dusko Rudan, Zijad Durakovic, Sasa Missoni, Ranajit Chakraborty, Pavao Rudan, Ranjan Deka

RegnANN: Reverse Engineering Gene Networks Using Artificial Neural Networks
Marco Grimaldi, Roberto Visintainer, Giuseppe Jurman

The Absence of MIST1 Leads to Increased Ethanol Sensitivity and Decreased Activity of the Unfolded Protein Response in Mouse Pancreatic Acinar Cells
Sruthi Alahari, Rashid Mehmood, Charis L. Johnson, Christopher L. Pin

Common Promoter Elements in Odorant and Vomeronasal Receptor Genes
Jussara S. Michaloski, Pedro A. F. Galante, Maíra H. Nagai, Lucia Armelin-Correa, Ming-Shan Chien, Hiroaki Matsunami, Bettina Malnic

Phenotype Prediction Using Regularized Regression on Genetic Data in the DREAM5 Systems Genetics B Challenge
Po-Ru Loh, George Tucker, Bonnie Berger

A Genome-Wide Association Study of the Protein C Anticoagulant Pathway
Georgios Athanasiadis, Alfonso Buil, Juan Carlos Souto, Montserrat Borrell, Sonia López, Angel Martinez-Perez, Mark Lathrop, Jordi Fontcuberta, Laura Almasy, José Manuel Soria

Phosphorylation and Activation of the Plasma Membrane Na+/H+ Exchanger (NHE1) during Osmotic Cell Shrinkage
Robert R. Rigor, Catalina Damoc, Brett S. Phinney, Peter M. Cala

Genome-Wide Association Study Identifies Candidate Genes That Affect Plant Height in Chinese Elite Maize (Zea mays L.) Inbred Lines
Jianfeng Weng, Chuanxiao Xie, Zhuanfang Hao, Jianjun Wang, Changlin Liu, Mingshun Li, Degui Zhang, Li Bai, Shihuang Zhang, Xinhai Li

Genome-Wide Identification of Transcriptional Start Sites in the Plant Pathogen Pseudomonas syringae pv. tomato str. DC3000
Melanie J. Filiatrault, Paul V. Stodghill, Christopher R. Myers, Philip A. Bronstein, Bronwyn G. Butcher, Hanh Lam, George Grills, Peter Schweitzer, Wei Wang, David J. Schneider, Samuel W. Cartinhour

Domain Analysis Reveals That a Deubiquitinating Enzyme USP13 Performs Non-Activating Catalysis for Lys63-Linked Polyubiquitin
Yu-Hang Zhang, Chen-Jie Zhou, Zi-Ren Zhou, Ai-Xin Song, Hong-Yu Hu

Nitric Oxide-Sensitive Guanylyl Cyclase Is Differentially Regulated by Nuclear and Non-Nuclear Estrogen Pathways in Anterior Pituitary Gland
Jimena P. Cabilla, Silvana I. Nudler, Sonia A. Ronchetti, Fernanda A. Quinteros, Mercedes Lasaga, Beatriz H. Duvilanski

Molecular Insights into the Pathogenesis of Alzheimer's Disease and Its Relationship to Normal Aging
Alexei A. Podtelezhnikov, Keith Q. Tanis, Michael Nebozhyn, William J. Ray, David J. Stone, Andrey P. Loboda

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Computer Science

Non-Negative Matrix Factorization for Learning Alignment-Specific Models of Protein Evolution
Ben Murrell, Thomas Weighill, Jan Buys, Robert Ketteringham, Sasha Moola, Gerdus Benade, Lise du Buisson, Daniel Kaliski, Tristan Hands, Konrad Scheffler

Parametric Construction of Episode Networks from Pseudoperiodic Time Series Based on Mutual Information
Frank Emmert-Streib

Dynamics of Resistance Development to Imatinib under Increasing Selection Pressure: A Combination of Mathematical Models and In Vitro Data
Benjamin Werner, David Lutz, Tim H. Brümmendorf, Arne Traulsen, Stefan Balabanov

Periodic Active Case Finding for TB: When to Look?
Peter J. Dodd, Richard G. White, Elizabeth L. Corbett

A Higher-Order Generalized Singular Value Decomposition for Comparison of Global mRNA Expression from Multiple Organisms
Sri Priya Ponnapalli, Michael A. Saunders, Charles F. Van Loan, Orly Alter

Physical Properties of Biological Entities: An Introduction to the Ontology of Physics for Biology
Daniel L. Cook, Fred L. Bookstein, John H. Gennari

Common and Unique Network Dynamics in Football Games
Yuji Yamamoto, Keiko Yokoyama

RegnANN: Reverse Engineering Gene Networks Using Artificial Neural Networks
Marco Grimaldi, Roberto Visintainer, Giuseppe Jurman

Directedness of Information Flow in Mobile Phone Communication Networks
Fernando Peruani, Lionel Tabourier

Interfacing External Quantum Devices to a Universal Quantum Computer
Antonio A. Lagana, Max A. Lohe, Lorenz von Smekal

A-6G and A-20C Polymorphisms in the Angiotensinogen Promoter and Hypertension Risk in Chinese: A Meta-Analysis
Wei Gu, Jielin Liu, Qiuli Niu, Hao Wang, Yuqing Lou, Kuo Liu, Lijuan Wang, Zuoguang Wang, Jingmei Zhang, Shaojun Wen

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Critical Care and Emergency Medicine

Infection of the Central Nervous System, Sepsis and Amyotrophic Lateral Sclerosis
Fang Fang, Honglei Chen, Karin Wirdefeldt, Lars-Olof Ronnevi, Ammar Al-Chalabi, Tracy L. Peters, Freya Kamel, Weimin Ye

Substance-Related Health Problems during Rave Parties in the Netherlands (1997–2008)
Jan Krul, Matthijs Blankers, Armand R. J. Girbes

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Dermatology

Pathway-Based Analysis of a Melanoma Genome-Wide Association Study: Analysis of Genes Related to Tumour-Immunosuppression
Nils Schoof, Mark M. Iles, D. Timothy Bishop, Julia A. Newton-Bishop, Jennifer H. Barrett, GenoMEL consortium

Association of a Deletion of GSTT2B with an Altered Risk of Oesophageal Squamous Cell Carcinoma in a South African Population: A Case-Control Study
Marco Matejcic, DongPing Li, Natalie J. Prescott, Cathryn M. Lewis, Christopher G. Mathew, M. Iqbal Parker

Composition of Human Skin Microbiota Affects Attractiveness to Malaria Mosquitoes
Niels O. Verhulst, Yu Tong Qiu, Hans Beijleveld, Chris Maliepaard, Dan Knights, Stefan Schulz, Donna Berg-Lyons, Christian L. Lauber, Willem Verduijn, Geert W. Haasnoot, Roland Mumm, Harro J. Bouwmeester, Frans H. J. Claas, Marcel Dicke, Joop J. A. van Loon, Willem Takken, Rob Knight, Renate C. Smallegange

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Developmental Biology

The Activity of Spontaneous Action Potentials in Developing Hair Cells Is Regulated by Ca2+-Dependence of a Transient K+ Current
Snezana Levic, Ping Lv, Ebenezer N. Yamoah

Who Needs Microtubules? Myogenic Reorganization of MTOC, Golgi Complex and ER Exit Sites Persists Despite Lack of Normal Microtubule Tracks
Kristien J. M. Zaal, Ericka Reid, Kambiz Mousavi, Tan Zhang, Amisha Mehta, Elisabeth Bugnard, Vittorio Sartorelli, Evelyn Ralston

Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
Koji Fujimura, Matthew A. Conte, Thomas D. Kocher

Role of Zebrafish Lbx2 in Embryonic Lateral Line Development
Xiaowen Chen, Qiyong Lou, Jiangyan He, Zhan Yin

Further Support to the Uncoupling-to-Survive Theory: The Genetic Variation of Human UCP Genes Is Associated with Longevity
Giuseppina Rose, Paolina Crocco, Francesco De Rango, Alberto Montesanto, Giuseppe Passarino

Epithelial Cells Derived from Swine Bone Marrow Express Stem Cell Markers and Support Influenza Virus Replication In Vitro
Mahesh Khatri, Yehia M. Saif

Lateral Gene Expression in Drosophila Early Embryos Is Supported by Grainyhead-Mediated Activation and Tiers of Dorsally-Localized Repression
Mayra Garcia, Angelike Stathopoulos

Duffy Antigen Receptor for Chemokines Mediates Chemokine Endocytosis through a Macropinocytosis-Like Process in Endothelial Cells
Yani Zhao, Nilam S. Mangalmurti, Zeyu Xiong, Bharat Prakash, Fengli Guo, Donna B. Stolz, Janet S. Lee

Restricting Microbial Exposure in Early Life Negates the Immune Benefits Associated with Gut Colonization in Environments of High Microbial Diversity
Imke E. Mulder, Bettina Schmidt, Marie Lewis, Margaret Delday, Christopher R. Stokes, Mick Bailey, Rustam I. Aminov, Bhupinder P. Gill, John R. Pluske, Claus-Dieter Mayer, Denise Kelly

Combinatorial Polymer Electrospun Matrices Promote Physiologically-Relevant Cardiomyogenic Stem Cell Differentiation
Mukesh K. Gupta, Joel M. Walthall, Raghav Venkataraman, Spencer W. Crowder, Dae Kwang Jung, Shann S. Yu, Tromondae K. Feaster, Xintong Wang, Todd D. Giorgio, Charles C. Hong, Franz J. Baudenbacher, Antonis K. Hatzopoulos, Hak-Joon Sung

Tramtrack Is Genetically Upstream of Genes Controlling Tracheal Tube Size in Drosophila
Barbara Rotstein, David Molnar, Boris Adryan, Marta Llimargas

A Crucial Role of Activin A-Mediated Growth Hormone Suppression in Mouse and Human Heart Failure
Noritoshi Fukushima, Katsuhisa Matsuura, Hiroshi Akazawa, Atsushi Honda, Toshio Nagai, Toshinao Takahashi, Akiko Seki, Kagari M. Murasaki, Tatsuya Shimizu, Teruo Okano, Nobuhisa Hagiwara, Issei Komuro

Improved Culture-Based Isolation of Differentiating Endothelial Progenitor Cells from Mouse Bone Marrow Mononuclear Cells
Haruki Sekiguchi, Masaaki Ii, Kentaro Jujo, Ayumi Yokoyama, Nobuhisa Hagiwara, Takayuki Asahara

The Effects of Mechanical Stress on the Growth, Differentiation, and Paracrine Factor Production of Cardiac Stem Cells
Hiroshi Kurazumi, Masayuki Kubo, Mako Ohshima, Yumi Yamamoto, Yoshihiro Takemoto, Ryo Suzuki, Shigeru Ikenaga, Akihito Mikamo, Koichi Udo, Kimikazu Hamano, Tao-Sheng Li

Zebrafish prox1b Mutants Develop a Lymphatic Vasculature, and prox1b Does Not Specifically Mark Lymphatic Endothelial Cells
Shijie Tao, Merlijn Witte, Robert J. Bryson-Richardson, Peter D. Currie, Benjamin M. Hogan, Stefan Schulte-Merker

In Vivo Tracking of Human Neural Stem Cells with 19F Magnetic Resonance Imaging
Philipp Boehm-Sturm, Luam Mengler, Stefan Wecker, Mathias Hoehn, Therése Kallur

Activation-Induced Cytidine Deaminase Expression in CD4+ T Cells is Associated with a Unique IL-10-Producing Subset that Increases with Age
Hongyan Qin, Keiichiro Suzuki, Mikiyo Nakata, Shunsuke Chikuma, Nakako Izumi, Le Thi Huong, Mikako Maruya, Sidonia Fagarasan, Meinrad Busslinger, Tasuku Honjo, Hitoshi Nagaoka

Prostate Cancer Cell Lines under Hypoxia Exhibit Greater Stem-Like Properties
Yuanyuan Ma, Dongming Liang, Jian Liu, Karol Axcrona, Gunnar Kvalheim, Trond Stokke, Jahn M. Nesland, Zhenhe Suo

RNA Deep Sequencing Reveals Differential MicroRNA Expression during Development of Sea Urchin and Sea Star
Sabah Kadri, Veronica F. Hinman, Panayiotis V. Benos

The Promigratory Activity of the Matricellular Protein Galectin-3 Depends on the Activation of PI-3 Kinase
Fabiana H. M. Melo, Diego Butera, Mara de Souza Junqueira, Daniel K. Hsu, Ana Maria Moura da Silva, Fu-Tong Liu, Marinilice F. Santos, Roger Chammas

Pax3 Stimulates p53 Ubiquitination and Degradation Independent of Transcription
Xiao Dan Wang, Sarah C. Morgan, Mary R. Loeken

Adult Body Weight Is Programmed by a Redox-Regulated and Energy-Dependent Process during the Pronuclear Stage in Mouse
Bernadette Banrezes, Thierry Sainte-Beuve, Eugénie Canon, Richard M. Schultz, José Cancela, Jean-Pierre Ozil

Activity-Induced Remodeling of Olfactory Bulb Microcircuits Revealed by Monosynaptic Tracing
Benjamin R. Arenkiel, Hiroshi Hasegawa, Jason J. Yi, Rylan S. Larsen, Michael L. Wallace, Benjamin D. Philpot, Fan Wang, Michael D. Ehlers

Promoting Long-Term Survival of Insulin-Producing Cell Grafts That Differentiate from Adipose Tissue-Derived Stem Cells to Cure Type 1 Diabetes
Shuzi Zhang, Hehua Dai, Ni Wan, Yolonda Moore, Zhenhua Dai

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Diabetes and Endocrinology

Protein Kinase C Delta (PKCδ) Affects Proliferation of Insulin-Secreting Cells by Promoting Nuclear Extrusion of the Cell Cycle Inhibitor p21Cip1/WAF1
Felicia Ranta, Johannes Leveringhaus, Dorothea Theilig, Gabriele Schulz-Raffelt, Anita M. Hennige, Dominic G. Hildebrand, René Handrick, Verena Jendrossek, Fatima Bosch, Klaus Schulze-Osthoff, Hans-Ulrich Häring, Susanne Ullrich

Nanotube Action between Human Mesothelial Cells Reveals Novel Aspects of Inflammatory Responses
Julia Ranzinger, Amin Rustom, Marcus Abel, Julia Leyh, Lars Kihm, Margarete Witkowski, Peter Scheurich, Martin Zeier, Vedat Schwenger

Estrogen-Mediated Upregulation of Noxa Is Associated with Cell Cycle Progression in Estrogen Receptor-Positive Breast Cancer Cells
Wensheng Liu, Wendy M. Swetzig, Rajesh Medisetty, Gokul M. Das

Fetal Microchimeric Cells in Blood of Women with an Autoimmune Thyroid Disease
Trees Lepez, Mado Vandewoestyne, Shahid Hussain, Filip Van Nieuwerburgh, Kris Poppe, Brigitte Velkeniers, Jean-Marc Kaufman, Dieter Deforce

Beta-Cell Specific Deletion of Dicer1 Leads to Defective Insulin Secretion and Diabetes Mellitus
Martins Kalis, Caroline Bolmeson, Jonathan L. S. Esguerra, Shashank Gupta, Anna Edlund, Neivis Tormo-Badia, Dina Speidel, Dan Holmberg, Sofia Mayans, Nelson K. S. Khoo, Anna Wendt, Lena Eliasson, Corrado M. Cilio

A Crucial Role of Activin A-Mediated Growth Hormone Suppression in Mouse and Human Heart Failure
Noritoshi Fukushima, Katsuhisa Matsuura, Hiroshi Akazawa, Atsushi Honda, Toshio Nagai, Toshinao Takahashi, Akiko Seki, Kagari M. Murasaki, Tatsuya Shimizu, Teruo Okano, Nobuhisa Hagiwara, Issei Komuro

Interactions between Plasma Levels of 25-Hydroxyvitamin D, Insulin-Like Growth Factor (IGF)-1 and C-Peptide with Risk of Colorectal Cancer
Kana Wu, Diane Feskanich, Charles S. Fuchs, Andrew T. Chan, Walter C. Willett, Bruce W. Hollis, Michael N. Pollak, Edward Giovannucci

Divergence in Sex Steroid Hormone Signaling between Sympatric Species of Japanese Threespine Stickleback
Jun Kitano, Yui Kawagishi, Seiichi Mori, Catherine L. Peichel, Takashi Makino, Masakado Kawata, Makoto Kusakabe

Reduced Food Intake and Body Weight in Mice Deficient for the G Protein-Coupled Receptor GPR82
Kathrin M. Y. Engel, Kristin Schröck, Daniel Teupser, Lesca Miriam Holdt, Anke Tönjes, Matthias Kern, Kerstin Dietrich, Peter Kovacs, Ute Krügel, Holger A. Scheidt, Jürgen Schiller, Daniel Huster, Gudrun A. Brockmann, Martin Augustin, Joachim Thiery, Matthias Blüher, Michael Stumvoll, Torsten Schöneberg, Angela Schulz

Nitric Oxide-Sensitive Guanylyl Cyclase Is Differentially Regulated by Nuclear and Non-Nuclear Estrogen Pathways in Anterior Pituitary Gland
Jimena P. Cabilla, Silvana I. Nudler, Sonia A. Ronchetti, Fernanda A. Quinteros, Mercedes Lasaga, Beatriz H. Duvilanski

Promoting Long-Term Survival of Insulin-Producing Cell Grafts That Differentiate from Adipose Tissue-Derived Stem Cells to Cure Type 1 Diabetes
Shuzi Zhang, Hehua Dai, Ni Wan, Yolonda Moore, Zhenhua Dai

Profiling Insulin Like Factor 3 (INSL3) Signaling in Human Osteoblasts
Alberto Ferlin, Lisa Perilli, Lisa Gianesello, Giuseppe Taglialavoro, Carlo Foresta

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Ecology

The Pore-Forming Protein Cry5B Elicits the Pathogenicity of Bacillus sp. against Caenorhabditis elegans
Melanie F. Kho, Audrey Bellier, Venkatasamy Balasubramani, Yan Hu, Wayne Hsu, Christina Nielsen-LeRoux, Shauna M. McGillivray, Victor Nizet, Raffi V. Aroian

Two Novel Parvoviruses in Frugivorous New and Old World Bats
Marta Canuti, Anna Maria Eis-Huebinger, Martin Deijs, Michel de Vries, Jan Felix Drexler, Samuel K. Oppong, Marcel A. Müller, Stefan M. Klose, Nele Wellinghausen, Veronika M. Cottontail, Elisabeth K. V. Kalko, Christian Drosten, Lia van der Hoek

Partitioning the Aggregation of Parasites on Hosts into Intrinsic and Extrinsic Components via an Extended Poisson-Gamma Mixture Model
Justin M. Calabrese, Jesse L. Brunner, Richard S. Ostfeld

The Contribution of Vegetation and Landscape Configuration for Predicting Environmental Change Impacts on Iberian Birds
Maria Triviño, Wilfried Thuiller, Mar Cabeza, Thomas Hickler, Miguel B. Araújo

Toward an Identification of Resources Influencing Habitat Use in a Multi-Specific Context
Emmanuelle Richard, Sonia Said, Jean-Luc Hamann, Jean-Michel Gaillard

Design and Implementation of Degenerate Microsatellite Primers for the Mammalian Clade
Emmanuel Buschiazzo, Josephine S. Beck, Neil J. Gemmell

Spatial Patterns of Parrotfish Corallivory in the Caribbean: The Importance of Coral Taxa, Density and Size
George Roff, Mary H. Ledlie, Juan C. Ortiz, Peter J. Mumby

Comparative Phylogeography in a Specific and Obligate Pollination Antagonism
Anahí Espíndola, Nadir Alvarez

Consequences of Non-Intervention for Infectious Disease in African Great Apes
Sadie J. Ryan, Peter D. Walsh

A Connection between Colony Biomass and Death in Caribbean Reef-Building Corals
Daniel J. Thornhill, Randi D. Rotjan, Brian D. Todd, Geoff C. Chilcoat, Roberto Iglesias-Prieto, Dustin W. Kemp, Todd C. LaJeunesse, Jennifer McCabe Reynolds, Gregory W. Schmidt, Thomas Shannon, Mark E. Warner, William K. Fitt

Energetic Conditions Promoting Top-Down Control of Prey by Predators
Kristin N. Marshall, Timothy E. Essington

The Danger of Having All Your Eggs in One Basket—Winter Crash of the Re-Introduced Przewalski's Horses in the Mongolian Gobi
Petra Kaczensky, Oyunsaikhan Ganbataar, Nanjid Altansukh, Namtar Enkhsaikhan, Christian Stauffer, Chris Walzer

Paleogene Radiation of a Plant Pathogenic Mushroom
Martin P. A. Coetzee, Paulette Bloomer, Michael J. Wingfield, Brenda D. Wingfield

Gene Discovery in the Threatened Elkhorn Coral: 454 Sequencing of the Acropora palmata Transcriptome
Nicholas R. Polato, J. Cristobal Vera, Iliana B. Baums

Improved Resolution of Reef-Coral Endosymbiont (Symbiodinium) Species Diversity, Ecology, and Evolution through psbA Non-Coding Region Genotyping
Todd C. LaJeunesse, Daniel J. Thornhill

Small-Scale Heterogeneity in Deep-Sea Nematode Communities around Biogenic Structures
Christiane Hasemann, Thomas Soltwedel

RNA Deep Sequencing Reveals Differential MicroRNA Expression during Development of Sea Urchin and Sea Star
Sabah Kadri, Veronica F. Hinman, Panayiotis V. Benos

Earthworm-Mycorrhiza Interactions Can Affect the Diversity, Structure and Functioning of Establishing Model Grassland Communities
Johann G. Zaller, Florian Heigl, Andrea Grabmaier, Claudia Lichtenegger, Katja Piller, Roza Allabashi, Thomas Frank, Thomas Drapela

Oxygen Sensitivity of Anammox and Coupled N-Cycle Processes in Oxygen Minimum Zones
Tim Kalvelage, Marlene M. Jensen, Sergio Contreras, Niels Peter Revsbech, Phyllis Lam, Marcel Günter, Julie LaRoche, Gaute Lavik, Marcel M. M. Kuypers

High Antipredatory Efficiency of Insular Lizards: A Warning Signal of Excessive Specimen Collection?
Miguel Delibes, María del Carmen Blázquez, Laura Soriano, Eloy Revilla, José Antonio Godoy

Jaw Laterality and Related Handedness in the Hunting Behavior of a Scale-Eating Characin, Exodon paradoxus
Hiroki Hata, Masaki Yasugi, Michio Hori

A Naturally Associated Rhizobacterium of Arabidopsis thaliana Induces a Starvation-Like Transcriptional Response while Promoting Growth
Jens Schwachtje, Silke Karojet, Ina Thormählen, Carolin Bernholz, Sabine Kunz, Stephan Brouwer, Melanie Schwochow, Karin Köhl, Joost T. van Dongen

Oxygen: A Fundamental Property Regulating Pelagic Ecosystem Structure in the Coastal Southeastern Tropical Pacific
Arnaud Bertrand, Alexis Chaigneau, Salvador Peraltilla, Jesus Ledesma, Michelle Graco, Florian Monetti, Francisco P. Chavez

'Caribbean Creep' Chills Out: Climate Change and Marine Invasive Species
João Canning-Clode, Amy E. Fowler, James E. Byers, James T. Carlton, Gregory M. Ruiz

Neighbours' Breeding Success and the Sex Ratio of Their Offspring Affect the Mate Preferences of Female Zebra Finches
Dominique Drullion, Frédérique Dubois

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Epidemiology

Parent-Offspring Correlations in Pedometer-Assessed Physical Activity
David Jacobi, Agnès Caille, Jean-Michel Borys, Agnès Lommez, Charles Couet, Marie-Aline Charles, Jean-Michel Oppert, FLVS Study Group

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Evolutionary Biology

Non-Negative Matrix Factorization for Learning Alignment-Specific Models of Protein Evolution
Ben Murrell, Thomas Weighill, Jan Buys, Robert Ketteringham, Sasha Moola, Gerdus Benade, Lise du Buisson, Daniel Kaliski, Tristan Hands, Konrad Scheffler

No Evidence of Murine Leukemia Virus-Related Viruses in Live Attenuated Human Vaccines
William M. Switzer, HaoQiang Zheng, Graham Simmons, Yanchen Zhou, Shaohua Tang, Anupama Shankar, Beatrix Kapusinszky, Eric L. Delwart, Walid Heneine

Circular DNA Intermediate in the Duplication of Nile Tilapia vasa Genes
Koji Fujimura, Matthew A. Conte, Thomas D. Kocher

Toward an Identification of Resources Influencing Habitat Use in a Multi-Specific Context
Emmanuelle Richard, Sonia Said, Jean-Luc Hamann, Jean-Michel Gaillard

Y-Chromosome Variation in Hominids: Intraspecific Variation Is Limited to the Polygamous Chimpanzee
Gabriele Greve, Evguenia Alechine, Juan J. Pasantes, Christine Hodler, Wolfram Rietschel, Terence J. Robinson, Werner Schempp

Design and Implementation of Degenerate Microsatellite Primers for the Mammalian Clade
Emmanuel Buschiazzo, Josephine S. Beck, Neil J. Gemmell

Differential Trends in the Codon Usage Patterns in HIV-

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